analyses-bacteria-gene-ontology

Bacteria-associated biological function

This module enables users to explore the biological processes which a given bacteria might be involved in. The associated biological functions are identified by FGSEA using the association between mRNA expression and bacterial abundance as gene rank.

Select a cancer type:

Select a taxonomy level:

Bacteria:

Select a gene set:

Adjusted p-value (cutoff):

Number of terms sorted by descending order of NES and shown in the bar chart:

Processing

Plot of the bacteria-associated biological function.

Table of the bacteria-associated biological function.

Cancer type	Taxonomy level	Bacteria	Term	p value	FDR	ES score	NES score	N more extreme	Size	Gene