analyses-bacteria-coabundance-network

Bacterial co-abundance network

This module enables users to retrieve the bacterial co-abundance network in a given tumor type. The co-abundance is measured by SparCC (Sparse Correlations for Compositional data).

Select a cancer type:

Select a taxonomy level:

Bacteria:

p-value (cutoff):

Display edges between first neighbors of the queried bacteria

Processing

Plot of the bacteria co-abundance network.

Table of the bacteria co-abundance network.

Cancer type	Taxonomy level	Bacteria_1	Bacteria_2	SparCC Cor	SparCC p-value